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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 11
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 11
Map Start: 0 bp
Map Stop: 28,512,666 bp
Features by Type:
185 Marker Oryza
114 QTL
299 Total

Map Features

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Items 1 to 25 of 299.       of 12 | Next
Rice - Synthetic_map1 - 11
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
300 QTL 10,129,824 - 12,010,000 No other positions
1740 QTL 18,407,879 - 21,426,217 No other positions
1342 QTL 16,767,319 - 18,408,009 No other positions
976 QTL 22,014,679 - 23,155,291 No other positions
541 QTL 5,460,751 - 6,686,558 No other positions
1471 QTL 9,951,738 - 18,320,226 No other positions
839 QTL 19,565,059 No other positions
126 QTL 19,172,832 - 19,565,672 No other positions
1699 QTL 24,200,468 - 27,202,086 No other positions
1298 QTL 16,767,319 - 18,408,009 No other positions
963 QTL 5,460,751 - 6,686,558 No other positions
498 QTL 19,565,059 - 22,014,851 No other positions
1457 QTL 18,407,879 - 21,426,217 No other positions
1275 QTL 383,711 - 2,840,362 No other positions
773 QTL 5,708,522 - 7,902,769 No other positions
117 QTL 19,172,832 - 19,565,672 No other positions
1655 QTL 21,425,337 - 22,099,273 No other positions
956 QTL 17,353,847 - 19,173,094 No other positions
487 QTL 19,565,059 No other positions
2177 QTL 18,178,945 - 19,565,672 No other positions
1437 QTL 6,686,166 - 6,686,558 No other positions
1260 QTL 18,407,879 - 19,173,094 No other positions
727 QTL 22,014,679 - 23,764,518 No other positions
1642 QTL 22,095,414 - 22,840,721 No other positions
948 QTL 17,353,847 - 19,173,094 No other positions